Marking 2D Regions
of Interest
The ROI tool is
accessible from the tool menu:

allows manual
delineation of regions of interest on any of the slice display windows:

Drawing
Regions
To mark a region
on any slice display, select 'Draw' from the tool and then press, hold
and drag with the RIGHT mouse button:

Releasing the mouse button then connects the start and end points and
displays the text info window with a summary of the statistics of the
intensity values for
each image volume loaded into rview, within this 2D region. These
include the mean and standard deviation (SD) together with the min and
max:

This can then be copied and pasted into other windows applications
using 'CTRL-C'

Notes
about values:
The statistics are created 'on the fly' by transforming the ROI points
in the display
plane co-ordinates into each of the image spaces (using the appropriate
volume
transformations determined by the display window and the registration
transformations for each data set) and interpolating the value at each
point using tri-linear interpolation. The screen pixels within the ROI
are
oversampled at a fine resolution (around 0.1mm) and the statistics are
then evaluated over this finely sampled grid of values. Since the ROI
values are interpolated from the 3D data. the effective 'thickness' of
the 2D ROI is dependent on the spatial resolution and point spread
function of the specific volume dataset (in each of its axes), AND the
orientation of the display plane with respect to the different axes of
the 3D data volume.
Clear ROI
To clear the current ROI select 'Clear ROI'
Save ROI
This prompts the user for a rview setup filename and then saves the ROI
points in this setup file (other setup values such as the current
images loaded and display layout are not saved in this setup file).
These can then be loaded into rview again later by simply dragging and
dropping the setup file into rview: The ROI will then be placed in the
same 3D location over the currently loaded 3D data volumes.
Alternatively 'Save View' can be used to
save everything describing the state of rview including the currently
marked ROI.